exRNAdisease

Entry Detail

---



General Information

Database ID: exR0380024 RNA Name: HYOU1 RNA Type: mRNA Chromosome: chr11 Starnd: - Coordinate: Start Site(bp): 119044188 End Site(bp): 119057227 External Links: ENSG00000149428

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ABCF2 chr7 151207837 151227166 - ABI2 chr2 203328239 203447728 + AC010422.3 chr19 12643831 12648397 - AC011448.1 chr19 19516227 19536076 + AC120057.2 chr17 7240427 7244635 - ACADM chr1 75724347 75787575 + ACSL3 chr2 222860942 222944639 + ADCY3 chr2 24819169 24919839 - AK2 chr1 33007940 33080996 - AL121594.1 chr14 35122549 35317474 + AL136454.1 chr1 192716132 192716653 + miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-146a-5p chr5 160485372 160485393 + hsa-miR-146b-5p chr10 102436520 102436542 + hsa-miR-650 chr22 22822791 22822811 + hsa-miR-361-3p chrX 85903641 85903663 - hsa-miR-541-3p chr14 101064548 101064569 + hsa-miR-1286 chr22 20249145 20249165 - circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC009446.1 chr8 71675300 71702786 + AC079781.5 chr7 97851688 97972985 - Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA