exRNAdisease

Entry Detail

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General Information

Database ID: exR0380045 RNA Name: ID1 RNA Type: mRNA Chromosome: chr20 Starnd: + Coordinate: Start Site(bp): 31605283 End Site(bp): 31606515 External Links: ENSG00000125968

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AC008581.2 chr5 77030902 77152155 + AC008878.3 chr19 7382834 7470241 + AC010422.3 chr19 12643831 12648397 - AC040162.1 chr16 67929614 67936017 - ACADVL chr17 7217125 7225266 + ACBD6 chr1 180269653 180502954 - ACTN4 chr19 38647649 38731589 + ACTR1B chr2 97655939 97664044 - AEBP2 chr12 19404045 19720801 + AGAP3 chr7 151085831 151144436 + AGFG1 chr2 227472152 227561214 + AGGF1 chr5 77029251 77065234 + AGO4 chr1 35808016 35857890 + AGPAT5 chr8 6708642 6761503 + AKR7A2 chr1 19303965 19312146 - AKT1S1 chr19 49869033 49878459 - AKT3 chr1 243488233 243851079 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC132217.1 chr11 2129121 2129964 - AL137782.1 chr13 75549773 75807120 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA