exRNAdisease

Entry Detail

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General Information

Database ID: exR0380141 RNA Name: IGFBP2 RNA Type: mRNA Chromosome: chr2 Starnd: + Coordinate: Start Site(bp): 216632828 End Site(bp): 216664436 External Links: ENSG00000115457

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ACTN4 chr19 38647649 38731589 + AC245033.1 chr15 82536788 82573194 - AC118553.2 chr1 99970011 100083321 + ALDOA chr16 30064164 30070457 + ACVR1B chr12 51951699 51997078 + AC093227.2 chr19 37689865 37719188 - AC010646.1 chr19 17235940 17255448 - AC011462.1 chr19 41350853 41425001 + AC093525.2 chr16 2496032 2520218 + ALCAM chr3 105366909 105576900 + AC093323.1 chr4 6663396 6676755 + AHCY chr20 34280268 34311802 - AKAP13 chr15 85380571 85749358 + AL358113.1 chr9 69035747 69255187 + ACTR1A chr10 102461881 102502712 - ACTB chr7 5527148 5563784 - AC010422.3 chr19 12643831 12648397 - AC073082.1 chr2 48632291 48755724 - ABHD8 chr19 17292131 17310236 - AAMP chr2 218264123 218270257 - AL162231.1 chr9 34664163 34666112 - ADRM1 chr20 62302093 62308862 + ADD2 chr2 70607618 70768225 - ADNP chr20 50888916 50931437 - AGO1 chr1 35869808 35930532 + ACTR2 chr2 65227753 65271253 + ACAT1 chr11 108116695 108147603 + AK1 chr9 127866486 127877675 - ACTG1 chr17 81509971 81523847 - ADAM19 chr5 157395534 157575775 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC009022.1 chr16 69976297 70065948 - AC009133.5 chr16 29808679 29812227 + AC010327.5 chr19 55216660 55221616 + AC012615.1 chr19 1874871 1876169 - AC016876.2 chr17 7581964 7584086 - AC023509.1 chr12 53441741 53467528 + AC097478.1 chr4 89743792 89744305 + AC106881.1 chr4 95549129 95552457 + AC113189.2 chr17 7420103 7444081 + AC113189.4 chr17 7439506 7445966 + AC114284.1 chr5 120781218 120790778 + AC132217.1 chr11 2129121 2129964 - AC245033.4 chr15 82533175 82540008 - Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA