exRNAdisease

Entry Detail

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General Information

Database ID: exR0380265 RNA Name: ILF3 RNA Type: mRNA Chromosome: chr19 Starnd: + Coordinate: Start Site(bp): 10654261 End Site(bp): 10692417 External Links: ENSG00000129351

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AC010422.3 chr19 12643831 12648397 - AGO1 chr1 35869808 35930532 + AC093525.2 chr16 2496032 2520218 + AC105052.3 chr7 102637049 102671641 - AC105052.1 chr7 102582523 102642869 - ACY1 chr3 51983340 51989197 + ADH5 chr4 99070978 99088801 - ADARB1 chr21 45073853 45226560 + ACTL6A chr3 179562886 179588407 + AGPAT2 chr9 136673143 136687457 - AC005258.1 chr19 2269525 2341172 + ALDOA chr16 30064164 30070457 + ABCA7 chr19 1039997 1065572 + AASS chr7 122073549 122144255 - ABHD14A-ACY1 chr3 51974706 51989183 + AL035078.4 chr11 31812391 32104665 + ACOT7 chr1 6264269 6394391 - AEN chr15 88621337 88632281 + AKR1A1 chr1 45550543 45570049 + AGAP1 chr2 235494043 236131800 + AL590132.1 chr1 210858125 211134146 - ABCF1 chr6 30571393 30597179 + AC011462.1 chr19 41350853 41425001 + AC027796.3 chr17 3585149 3636249 - ACTG1 chr17 81509971 81523847 - AC124312.1 chr15 24955034 25000276 + ACTB chr7 5527148 5563784 - AL031708.1 chr16 1632259 1686715 + ACBD6 chr1 180269653 180502954 - ABHD14B chr3 51968510 51983409 - miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-147a chr9 120244985 120245004 - hsa-miR-27b-3p chr9 95085505 95085525 + hsa-miR-513a-5p chrX 147213538 147213555 - circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC010536.1 chr16 87693537 87696147 - AC125807.2 chr12 3041437 3044950 + AC132217.1 chr11 2129121 2129964 - AC139149.1 chr17 81514047 81527776 + AD000090.1 chr19 35557956 35581954 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA