exRNAdisease

Entry Detail

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General Information

Database ID: exR0380272 RNA Name: IMP3 RNA Type: mRNA Chromosome: chr15 Starnd: - Coordinate: Start Site(bp): 75639085 End Site(bp): 75648706 External Links: ENSG00000177971

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ABCC10 chr6 43427366 43450427 + AC005258.1 chr19 2269525 2341172 + AC008764.1 chr19 16479067 16628204 - AC118553.2 chr1 99970011 100083321 + AC139530.2 chr17 81703371 81720539 + ACADS chr12 120725774 120740008 + ACAP3 chr1 1292390 1309609 - ACIN1 chr14 23058564 23095614 - ACSL1 chr4 184755595 184826818 - ACTC1 chr15 34790230 34795549 - ACTN4 chr19 38647649 38731589 + AFF1 chr4 86935002 87141054 + AGPAT3 chr21 43865223 43987592 + AGRN chr1 1020120 1056118 + AIMP2 chr7 6009255 6023834 + AKT1 chr14 104769349 104795751 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC020928.2 chr19 36773712 36775908 - AC022098.1 chr19 14137146 14171267 + AC084082.1 chr8 66112667 66126632 + AL121992.1 chr1 15586136 15603626 - Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA