exRNAdisease

Entry Detail

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General Information

Database ID: exR0380279 RNA Name: IMPDH2 RNA Type: mRNA Chromosome: chr3 Starnd: - Coordinate: Start Site(bp): 49024325 End Site(bp): 49029408 External Links: ENSG00000178035

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AC010422.3 chr19 12643831 12648397 - AC011511.4 chr19 10315471 10320678 - AC138811.2 chr16 18788063 18801519 - AC245033.1 chr15 82536788 82573194 - ACAT2 chr6 159762045 159779112 + ACD chr16 67657512 67660815 - ACTB chr7 5527148 5563784 - ACTN4 chr19 38647649 38731589 + ACTR2 chr2 65227753 65271253 + AGPAT5 chr8 6708642 6761503 + AHSA1 chr14 77457870 77469472 + AICDA chr12 8602170 8612867 - AL121594.1 chr14 35122549 35317474 + AL121753.1 chr20 35267885 35280043 - AL358113.1 chr9 69035747 69255187 + miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC007780.1 chr17 68413623 68524949 + AC023509.1 chr12 53441741 53467528 + AC024940.6 chr12 31280422 31280895 - AC067852.2 chr17 42552436 42554748 - AC096536.3 chr1 54874672 54883664 + AC109460.3 chr16 28974804 28990775 + AC125807.2 chr12 3041437 3044950 + AL022311.1 chr22 37876148 37895563 + AL031118.1 chr6 27404010 27406964 - AL031779.1 chr6 56331788 56332117 - Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA