exRNAdisease

Entry Detail

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General Information

Database ID: exR0381075 RNA Name: LAPTM5 RNA Type: mRNA Chromosome: chr1 Starnd: - Coordinate: Start Site(bp): 30732469 End Site(bp): 30757774 External Links: ENSG00000162511

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ABHD2 chr15 89087459 89202355 + AC004922.1 chr7 99325879 99394653 + AC007192.1 chr19 18153158 18178117 + AC009690.3 chr15 72266746 72319946 - AC010422.3 chr19 12643831 12648397 - AC015813.2 chr17 57989038 58007246 - AC069503.2 chr12 121888809 121921470 + AC104452.1 chr3 49416777 49429314 - AC104472.3 chr3 155763043 155854442 - AC118549.1 chr1 77562416 77683419 - ACAT2 chr6 159762045 159779112 + ACO1 chr9 32384603 32454769 + ACTA1 chr1 229431245 229434098 - ACTB chr7 5527148 5563784 - ACTG1 chr17 81509971 81523847 - AGPAT1 chr6 32168212 32178096 - AHCY chr20 34280268 34311802 - AKR1A1 chr1 45550543 45570049 + AKT2 chr19 40230317 40285536 - AL121594.1 chr14 35122549 35317474 + AL136454.1 chr1 192716132 192716653 + AL358113.1 chr9 69035747 69255187 + AL645941.2 chr6 32937364 32953122 - ALDOA chr16 30064164 30070457 + miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC010226.1 chr5 115602057 115623897 + AC016876.2 chr17 7581964 7584086 - AC040162.3 chr16 67882461 67886367 + AC051619.7 chr15 45200325 45200632 - AC245014.3 chr1 145281116 145281462 + AC245884.11 chr19 54308915 54337168 - Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA