exRNAdisease

Entry Detail

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General Information

Database ID: exR0381123 RNA Name: LDHA RNA Type: mRNA Chromosome: chr11 Starnd: + Coordinate: Start Site(bp): 18394560 End Site(bp): 18408425 External Links: ENSG00000134333

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AL136454.1 chr1 192716132 192716653 + AKIRIN1 chr1 38991276 39006059 + AJUBA chr14 22971177 22982551 - ADAR chr1 154582057 154628013 - AC073508.2 chr17 40627356 40665141 - AKAP11 chr13 42272152 42323261 + AKR1A1 chr1 45550543 45570049 + ABHD8 chr19 17292131 17310236 - AGTRAP chr1 11736084 11754802 + AC006030.1 chr2 74211604 74363377 - ADGRA3 chr4 22345071 22516066 - ACTR2 chr2 65227753 65271253 + AL022238.4 chr22 40346529 40410054 + ACTR1B chr2 97655939 97664044 - ACTR3 chr2 113890063 113962596 + ADCY1 chr7 45574140 45723116 + AL139353.1 chr14 31334312 31457441 - ACY3 chr11 67642555 67650730 - AC004922.1 chr7 99325879 99394653 + ACTG1 chr17 81509971 81523847 - ABCB7 chrX 75051048 75156732 - AL021546.1 chr12 120438198 120460006 + AL136295.5 chr14 24147548 24166452 + AAR2 chr20 36236459 36270918 + AC138811.2 chr16 18788063 18801519 - AC023055.1 chr12 55757275 55827546 - AIP chr11 67483026 67491103 + AC139530.2 chr17 81703371 81720539 + ABT1 chr6 26596953 26600739 + ADTRP chr6 11712054 11807046 - miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-302a-3p chr4 112648186 112648208 - hsa-miR-4426 chr1 192716333 192716349 + circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC008870.2 chr16 23670011 23675499 + AC010442.1 chr5 466124 473098 - AC010655.2 chr7 128455937 128469197 + AC010655.4 chr7 128455840 128493859 + AC012236.1 chr15 31221999 31230838 - AC016876.2 chr17 7581964 7584086 - AC020663.1 chr16 4730115 4752565 - AC022098.1 chr19 14137146 14171267 + AC023509.1 chr12 53441741 53467528 + AC026362.1 chr12 122975320 122982907 + AC091564.7 chr11 6610883 6616594 - AC092368.3 chr16 46622861 46624451 - AC109460.3 chr16 28974804 28990775 + AL035458.2 chr20 34234840 34281173 - AL117378.1 chr6 131901963 131920565 + AL132780.1 chr14 22929607 22956374 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA