exRNAdisease

Entry Detail

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General Information

Database ID: exR0381686 RNA Name: MAPK8IP3 RNA Type: mRNA Chromosome: chr16 Starnd: + Coordinate: Start Site(bp): 1706183 End Site(bp): 1770317 External Links: ENSG00000138834

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ABHD2 chr15 89087459 89202355 + AC005943.1 chr19 1578339 1605445 - AC068580.4 chr11 1734821 1763954 - AC120057.2 chr17 7240427 7244635 - AC245033.1 chr15 82536788 82573194 - ADGRV1 chr5 90529344 91164437 + ADSL chr22 40346500 40390463 + AFG3L2 chr18 12328944 12377227 - AGAP3 chr7 151085831 151144436 + AGO3 chr1 35930718 36072500 + AGO4 chr1 35808016 35857890 + AL022238.4 chr22 40346529 40410054 + AL133352.1 chr10 100505628 100529881 - ALDH18A1 chr10 95605941 95656711 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC067930.1 chr8 143579636 143580670 + AC093827.4 chr4 86924630 86936202 - AC245033.4 chr15 82533175 82540008 - AL031710.2 chr16 1707252 1707973 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA