exRNAdisease

Entry Detail

---



General Information

Database ID: exR0381720 RNA Name: MAT2A RNA Type: mRNA Chromosome: chr2 Starnd: + Coordinate: Start Site(bp): 85539168 End Site(bp): 85545281 External Links: ENSG00000168906

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ABCF2 chr7 151207837 151227166 - ABHD2 chr15 89087459 89202355 + ABLIM1 chr10 114431113 114768061 - AC005258.1 chr19 2269525 2341172 + AC010422.3 chr19 12643831 12648397 - AC091167.2 chr15 90249556 90272208 + AC107871.1 chr15 68184032 68229718 - ACTG1 chr17 81509971 81523847 - AGFG1 chr2 227472152 227561214 + AHCY chr20 34280268 34311802 - AIF1L chr9 131096476 131123152 + AKIP1 chr11 8911139 8920084 + miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC007952.4 chr17 19112000 19112636 - AC016876.2 chr17 7581964 7584086 - AC026471.1 chr16 31456711 31459736 - AC083880.1 chr7 139359032 139359566 - AC104162.2 chr3 63863155 63905838 + AL136531.1 chr20 1361622 1362585 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA