Entry Detail


General Information

Database ID:exR0381849
RNA Name:MEF2A
RNA Type:mRNA
Chromosome:chr15
Starnd:+
Coordinate:
Start Site(bp):99565417End Site(bp):99716466
External Links:ENSG00000068305



Disease Information

Disease Name:Low Birth Weight
Disease Category:Other Diseases
MeSH ID:D007230
Type:Age Groups/Infant
Alias:Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights



Expression Detail

GEO ID:GSE29807
Description:Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns
Experimental Design:Disease vs Control
Case Disease Type:Low Birth Weight
Case Disease SubType:NA
Case Sample:Low Birth Weight
Control Sample:Normal
Number of Case:8
Number of Control:4
Number of Samples:12





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ACSF2
chr17
50426158
50474845
+
AGFG1
chr2
227472152
227561214
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-194-5p
chr11
64891404
64891425
-
hsa-miR-380-3p
chr14
101025056
101025077
+
hsa-miR-450b-5p
chrX
134540231
134540252
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AD000090.1
chr19
35557956
35581954
+
Display:



Experiment Detail

GEO ID:GSE29807
Sample Source:Cord Blood
Source Fraction:Umblical Cord Blood
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions.
RNA library preparation protocol:Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA