exRNAdisease

Entry Detail

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General Information

Database ID: exR0381916 RNA Name: MFGE8 RNA Type: mRNA Chromosome: chr15 Starnd: - Coordinate: Start Site(bp): 88898683 End Site(bp): 88913381 External Links: ENSG00000140545

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AC007040.2 chr2 70939318 70995336 - AC131160.1 chr3 183815568 183884889 - AC245033.1 chr15 82536788 82573194 - ACER3 chr11 76860867 77026797 + ACTN1 chr14 68874143 68979440 - ACVR1B chr12 51951699 51997078 + ADO chr10 62804720 62808479 + ADRA2C chr4 3766348 3768526 + ADSL chr22 40346500 40390463 + AEN chr15 88621337 88632281 + AFG3L2 chr18 12328944 12377227 - AGBL5 chr2 27042364 27070622 + AGO4 chr1 35808016 35857890 + AGRN chr1 1020120 1056118 + AHCY chr20 34280268 34311802 - AL022238.4 chr22 40346529 40410054 + AL359922.1 chr9 21802636 22029594 + AL512785.2 chr1 162365407 162383531 + ALDH3A2 chr17 19648136 19685760 + miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC144652.1 chr7 155295918 155297541 - AC245033.4 chr15 82533175 82540008 - AD000090.1 chr19 35557956 35581954 + AF106564.1 chr8 24912165 24914717 - AL022311.1 chr22 37876148 37895563 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA