exRNAdisease

Entry Detail

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General Information

Database ID: exR0381979 RNA Name: MIF RNA Type: mRNA Chromosome: chr22 Starnd: + Coordinate: Start Site(bp): 23894383 End Site(bp): 23895227 External Links: ENSG00000240972

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AIF1L chr9 131096476 131123152 + AC120057.2 chr17 7240427 7244635 - AL139300.1 chr14 103562962 103685924 + AHNAK chr11 62433542 62556235 - AIMP2 chr7 6009255 6023834 + AC024592.3 chr19 5866171 5903787 - AL121594.1 chr14 35122549 35317474 + ACTR1B chr2 97655939 97664044 - ALDH1L1 chr3 126103562 126197994 - ABCF1 chr6 30571393 30597179 + AC007192.1 chr19 18153158 18178117 + ABRACL chr6 139028745 139043302 + AHCY chr20 34280268 34311802 - AL645941.2 chr6 32937364 32953122 - ALDH3A2 chr17 19648136 19685760 + ACAP3 chr1 1292390 1309609 - AC091167.2 chr15 90249556 90272208 + AC010422.3 chr19 12643831 12648397 - ABCD3 chr1 94418389 94518666 + AC131160.1 chr3 183815568 183884889 - AC010132.3 chr7 42909273 42932174 - AL365205.1 chr6 41780349 41790141 + ACTB chr7 5527148 5563784 - ALDH9A1 chr1 165662216 165698863 - AC040162.1 chr16 67929614 67936017 - AAAS chr12 53307456 53324864 - AIDA chr1 222668013 222713210 - AKR7A2 chr1 19303965 19312146 - ACTR2 chr2 65227753 65271253 + ACAP1 chr17 7336529 7351477 + miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-320a-3p chr8 22244975 22244996 - circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC004241.1 chr12 47706083 47742294 + AC016876.2 chr17 7581964 7584086 - AC023790.2 chr12 13000451 13040679 + AC026362.1 chr12 122975320 122982907 + AC051619.7 chr15 45200325 45200632 - AC108134.2 chr16 3156736 3157483 - AC245014.3 chr1 145281116 145281462 + AL022311.1 chr22 37876148 37895563 + AL121992.1 chr1 15586136 15603626 - AL137782.1 chr13 75549773 75807120 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA