exRNAdisease

Entry Detail

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General Information

Database ID: exR0382407 RNA Name: MYBBP1A RNA Type: mRNA Chromosome: chr17 Starnd: - Coordinate: Start Site(bp): 4538897 End Site(bp): 4555631 External Links: ENSG00000132382

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AC006486.1 chr19 42234583 42255132 - AC007192.1 chr19 18153158 18178117 + AC010132.3 chr7 42909273 42932174 - ACTG1 chr17 81509971 81523847 - ADCY6 chr12 48766194 48789037 - AK2 chr1 33007940 33080996 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC007952.4 chr17 19112000 19112636 - AC010980.2 chr2 222317242 222318653 - AC073508.3 chr17 40648300 40649718 + AC073957.2 chr7 1055360 1059261 - AC108134.2 chr16 3156736 3157483 - AL021707.1 chr22 38739003 38749041 + AL031282.2 chr1 1702736 1737688 - Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA