exRNAdisease

Entry Detail

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General Information

Database ID: exR0382709 RNA Name: NDUFV1 RNA Type: mRNA Chromosome: chr11 Starnd: + Coordinate: Start Site(bp): 67605653 End Site(bp): 67612554 External Links: ENSG00000167792

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ABCA2 chr9 137007234 137028922 - AC004832.3 chr22 30409255 30428990 + AC090360.1 chr18 80034346 80097088 + ACLY chr17 41866917 41930542 - ACOX1 chr17 75941507 75979177 - ACTB chr7 5527148 5563784 - ADA chr20 44619522 44652233 - ADAMTS13 chr9 133414358 133459402 + ADAR chr1 154582057 154628013 - ADCK2 chr7 140672945 140696261 + ADCY9 chr16 3953387 4116442 - ADGRV1 chr5 90529344 91164437 + ADRM1 chr20 62302093 62308862 + AIMP2 chr7 6009255 6023834 + AKR1A1 chr1 45550543 45570049 + ALDOA chr16 30064164 30070457 + miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC020663.1 chr16 4730115 4752565 - Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA