exRNAdisease

Entry Detail

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General Information

Database ID: exR0383434 RNA Name: OS9 RNA Type: mRNA Chromosome: chr12 Starnd: + Coordinate: Start Site(bp): 57693955 End Site(bp): 57721557 External Links: ENSG00000135506

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AAMP chr2 218264123 218270257 - AC006064.6 chr12 6556886 6607367 - AC008982.1 chr19 38817471 38840178 - AC073896.1 chr12 56285916 56316059 - AC092073.1 chr19 34396315 34409364 + AC104581.2 chr17 7925931 7930622 - ACADM chr1 75724347 75787575 + ACLY chr17 41866917 41930542 - ACTB chr7 5527148 5563784 - ACTR1A chr10 102461881 102502712 - ACTR5 chr20 38748460 38772520 + ADH5 chr4 99070978 99088801 - AHCTF1 chr1 246839098 246931967 - AIG1 chr6 143060496 143341058 + AKAP8L chr19 15380050 15419141 - ALDH18A1 chr10 95605941 95656711 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC020910.5 chr19 34733298 34733837 - Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA