exRNAdisease

Entry Detail

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General Information

Database ID: exR0384365 RNA Name: POLR1D RNA Type: mRNA Chromosome: chr13 Starnd: + Coordinate: Start Site(bp): 27620742 End Site(bp): 27744237 External Links: ENSG00000186184

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ABCC4 chr13 95019835 95301475 - AC009133.6 chr16 29812261 29820092 + AC011448.1 chr19 19516227 19536076 + AC087289.3 chr17 75898645 75930129 - AC092143.1 chr16 89919165 89936092 + AC093155.3 chr1 86993009 87169204 + AC124312.1 chr15 24955034 25000276 + ACLY chr17 41866917 41930542 - ACOT7 chr1 6264269 6394391 - ACSS3 chr12 80936414 81261210 + ACTB chr7 5527148 5563784 - ACTG1 chr17 81509971 81523847 - ACTL6A chr3 179562886 179588407 + ACTR1A chr10 102461881 102502712 - ACTR2 chr2 65227753 65271253 + AD000671.2 chr19 35739252 35745432 - ADSL chr22 40346500 40390463 + AGPAT5 chr8 6708642 6761503 + AKT3 chr1 243488233 243851079 - AL022238.4 chr22 40346529 40410054 + AL365205.1 chr6 41780349 41790141 + miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC142472.1 chr17 45146730 45148470 - AC244517.5 chr5 141046260 141096402 - AD000090.1 chr19 35557956 35581954 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA