exRNAdisease

Entry Detail

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General Information

Database ID: exR0384432 RNA Name: POU5F1B RNA Type: mRNA Chromosome: chr8 Starnd: + Coordinate: Start Site(bp): 127322183 End Site(bp): 127420066 External Links: ENSG00000212993

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ABI2 chr2 203328239 203447728 + AC007998.2 chr18 35443871 35497940 - AC068580.4 chr11 1734821 1763954 - ACADVL chr17 7217125 7225266 + ACIN1 chr14 23058564 23095614 - ACLY chr17 41866917 41930542 - ACTR2 chr2 65227753 65271253 + AEN chr15 88621337 88632281 + AGAP3 chr7 151085831 151144436 + AIF1L chr9 131096476 131123152 + AL121758.1 chr20 646626 675800 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC021242.3 chr8 9555144 9556520 - AC023908.2 chr15 39770559 39801333 - Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA