exRNAdisease

Entry Detail

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General Information

Database ID: exR0384678 RNA Name: PRMT5 RNA Type: mRNA Chromosome: chr14 Starnd: - Coordinate: Start Site(bp): 22920525 End Site(bp): 22929408 External Links: ENSG00000100462

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AARSD1 chr17 42950526 42964498 - ABCC4 chr13 95019835 95301475 - ABHD16A chr6 31686955 31703356 - ABL1 chr9 130713016 130887675 + AC008403.1 chr19 48465837 48472431 + ACIN1 chr14 23058564 23095614 - ACTG1 chr17 81509971 81523847 - ACTR2 chr2 65227753 65271253 + ADAR chr1 154582057 154628013 - AL117348.2 chr1 225886696 225924278 - AL132780.3 chr14 22946270 22982258 - AL139300.1 chr14 103562962 103685924 + miRNA targets: NA circRNA targets: NA lncRNA targets: NA Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA