exRNAdisease

Entry Detail

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General Information

Database ID: exR0385323 RNA Name: RCC2 RNA Type: mRNA Chromosome: chr1 Starnd: - Coordinate: Start Site(bp): 17406760 End Site(bp): 17439677 External Links: ENSG00000179051

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AC002996.1 chr12 111753890 111791418 + AC007192.1 chr19 18153158 18178117 + AC010422.3 chr19 12643831 12648397 - AC091167.2 chr15 90249556 90272208 + AC097637.1 chr3 52221081 52231190 - ACTA1 chr1 229431245 229434098 - ACTB chr7 5527148 5563784 - ACTG1 chr17 81509971 81523847 - ADCY5 chr3 123282296 123449758 - ADD3 chr10 109996368 110135565 + AL133352.1 chr10 100505628 100529881 - AL136454.1 chr1 192716132 192716653 + ALDH18A1 chr10 95605941 95656711 - ALDH1B1 chr9 38392702 38398661 + ALDH2 chr12 111766887 111817532 + ALDOA chr16 30064164 30070457 + miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-7-5p chr19 4770700 4770723 + hsa-miR-204-5p chr9 70810031 70810052 - hsa-miR-211-5p chr15 31065095 31065116 - hsa-miR-149-5p chr2 240456015 240456037 + hsa-miR-485-5p chr14 101055427 101055448 + hsa-miR-519c-5p chr19 53686484 53686505 + hsa-miR-620 chr12 116148575 116148594 - hsa-miR-519b-5p chr19 53695225 53695246 + hsa-miR-1270 chr19 20399320 20399342 - hsa-miR-4468 chr7 138123803 138123820 + circRNA targets: NA lncRNA targets: NA Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA