exRNAdisease

Entry Detail

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General Information

Database ID: exR0385470 RNA Name: RHEB RNA Type: mRNA Chromosome: chr7 Starnd: - Coordinate: Start Site(bp): 151466012 End Site(bp): 151520120 External Links: ENSG00000106615

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ABHD13 chr13 108218392 108234243 + AC004922.1 chr7 99325879 99394653 + AC005258.1 chr19 2269525 2341172 + AC007192.1 chr19 18153158 18178117 + AC010422.3 chr19 12643831 12648397 - AC011462.1 chr19 41350853 41425001 + AC078927.1 chr12 66123917 66169985 - AC105052.3 chr7 102637049 102671641 - ACOT7 chr1 6264269 6394391 - ACSS3 chr12 80936414 81261210 + ACTB chr7 5527148 5563784 - ACVR2B chr3 38453890 38493142 + ADCY1 chr7 45574140 45723116 + AFF1 chr4 86935002 87141054 + AFF4 chr5 132875395 132963634 - AHCY chr20 34280268 34311802 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC116407.1 chr17 32141226 32143135 - Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA