exRNAdisease

Entry Detail

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General Information

Database ID: exR0385696 RNA Name: RPL10A RNA Type: mRNA Chromosome: chr6 Starnd: + Coordinate: Start Site(bp): 35468401 End Site(bp): 35470785 External Links: ENSG00000198755

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AAAS chr12 53307456 53324864 - AAGAB chr15 67200667 67255195 - AAMP chr2 218264123 218270257 - ABLIM1 chr10 114431113 114768061 - AC004922.1 chr7 99325879 99394653 + AC007192.1 chr19 18153158 18178117 + AC011530.1 chr19 45779437 45785973 - AC040162.1 chr16 67929614 67936017 - AC069368.1 chr15 64841883 64930920 + AC087289.3 chr17 75898645 75930129 - AC090360.1 chr18 80034346 80097088 + AC091167.2 chr15 90249556 90272208 + AC105052.3 chr7 102637049 102671641 - AC119396.1 chr19 7348943 7383385 + ACACA chr17 37084992 37406836 - ACBD6 chr1 180269653 180502954 - ACTR2 chr2 65227753 65271253 + ADD3 chr10 109996368 110135565 + ADSL chr22 40346500 40390463 + AGBL5 chr2 27042364 27070622 + AHCYL1 chr1 109984765 110023742 + AKAP13 chr15 85380571 85749358 + AKNA chr9 114334156 114394405 - AL022238.4 chr22 40346529 40410054 + AL136454.1 chr1 192716132 192716653 + ALDOA chr16 30064164 30070457 + miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-7111-5p chr6 35470509 35470530 + hsa-miR-7111-3p chr6 35470558 35470579 + circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC012615.1 chr19 1874871 1876169 - AC020663.1 chr16 4730115 4752565 - AC023509.1 chr12 53441741 53467528 + AC063949.2 chr12 92421531 92483680 + AC067930.3 chr8 143541973 143549729 - AC126365.1 chr17 20788071 20789584 + AC132217.1 chr11 2129121 2129964 - AL022311.1 chr22 37876148 37895563 + AL110115.2 chr20 31580890 31581214 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA