exRNAdisease

Entry Detail

---



General Information

Database ID: exR0385702 RNA Name: RPL14 RNA Type: mRNA Chromosome: chr3 Starnd: + Coordinate: Start Site(bp): 40457292 End Site(bp): 40468587 External Links: ENSG00000188846

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ABCA1 chr9 104781006 104928155 - ABCB6 chr2 219209772 219218994 - AC010422.3 chr19 12643831 12648397 - AC068946.2 chr2 219209772 219222738 - AC105052.1 chr7 102582523 102642869 - AC105052.3 chr7 102637049 102671641 - AC126283.2 chr4 109713916 109801999 - AC245033.1 chr15 82536788 82573194 - ACAD9 chr3 128879596 128916067 + ACKR3 chr2 236567787 236582354 + ACLY chr17 41866917 41930542 - ACO2 chr22 41469117 41528989 + ACPP chr3 132317369 132368298 + ACSS1 chr20 25006230 25058980 - ACTB chr7 5527148 5563784 - ACTG1 chr17 81509971 81523847 - ACTR1B chr2 97655939 97664044 - ACTR3 chr2 113890063 113962596 + ADAM33 chr20 3667965 3682246 - ADPGK chr15 72751369 72785846 - ADRM1 chr20 62302093 62308862 + AGO4 chr1 35808016 35857890 + AGPAT5 chr8 6708642 6761503 + AIF1L chr9 131096476 131123152 + AK4 chr1 65147549 65232145 + AL049629.2 chr11 33698261 33722467 - AL136454.1 chr1 192716132 192716653 + AL355987.3 chr9 136791379 136800595 + ALDH18A1 chr10 95605941 95656711 - ALDH1L2 chr12 105019784 105107643 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC004943.2 chr16 72665123 72822781 + AC005540.1 chr2 190880797 190882059 - AC011468.5 chr19 52049007 52049754 + AC105383.1 chr4 133075311 133149147 - AC108010.1 chr7 128574751 128626473 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA