exRNAdisease

Entry Detail

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General Information

Database ID: exR0385710 RNA Name: RPL22 RNA Type: mRNA Chromosome: chr1 Starnd: - Coordinate: Start Site(bp): 6185020 End Site(bp): 6209389 External Links: ENSG00000116251

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ABTB2 chr11 34150987 34358010 - AC007192.1 chr19 18153158 18178117 + AC011462.1 chr19 41350853 41425001 + AC015813.2 chr17 57989038 58007246 - AC067968.1 chr19 44025354 44087318 + AC092073.1 chr19 34396315 34409364 + ACAT1 chr11 108116695 108147603 + ACTG1 chr17 81509971 81523847 - ACTR2 chr2 65227753 65271253 + ADAR chr1 154582057 154628013 - ADIPOR1 chr1 202940826 202958572 - AGO1 chr1 35869808 35930532 + AHCY chr20 34280268 34311802 - AHCYL1 chr1 109984765 110023742 + AHCYL2 chr7 129225023 129430211 + AICDA chr12 8602170 8612867 - AK4 chr1 65147549 65232145 + AKAP1 chr17 57085092 57121346 + AKAP11 chr13 42272152 42323261 + AKAP13 chr15 85380571 85749358 + AL049779.1 chr14 67659820 67690367 - AL136454.1 chr1 192716132 192716653 + AL139300.1 chr14 103562962 103685924 + AL365205.1 chr6 41780349 41790141 + ALDOA chr16 30064164 30070457 + miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC132217.1 chr11 2129121 2129964 - AD000090.1 chr19 35557956 35581954 + AL031847.1 chr1 6204840 6205780 - Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA