exRNAdisease

Entry Detail

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General Information

Database ID: exR0385721 RNA Name: RPL30 RNA Type: mRNA Chromosome: chr8 Starnd: - Coordinate: Start Site(bp): 98024851 End Site(bp): 98046469 External Links: ENSG00000156482

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AC004922.1 chr7 99325879 99394653 + AC010422.3 chr19 12643831 12648397 - AC069503.2 chr12 121888809 121921470 + AC073508.2 chr17 40627356 40665141 - AC090517.4 chr15 56652488 56918571 - AC120057.2 chr17 7240427 7244635 - AC245033.1 chr15 82536788 82573194 - ACADM chr1 75724347 75787575 + ACAT2 chr6 159762045 159779112 + ACSL3 chr2 222860942 222944639 + ACTB chr7 5527148 5563784 - ACTR1A chr10 102461881 102502712 - ADSL chr22 40346500 40390463 + AGTRAP chr1 11736084 11754802 + AHCY chr20 34280268 34311802 - AICDA chr12 8602170 8612867 - AL022238.4 chr22 40346529 40410054 + AL136295.5 chr14 24147548 24166452 + AL138752.2 chr9 37588413 38068687 - AL513165.2 chr9 37512547 37592469 - AL713999.1 chr1 155169409 155187272 - ALDH18A1 chr10 95605941 95656711 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC027097.1 chr18 57630302 57669296 + AC027097.2 chr18 57639455 57738603 + AC105339.2 chr15 82752884 82757208 + AC245033.4 chr15 82533175 82540008 - AL132780.1 chr14 22929607 22956374 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA