exRNAdisease

Entry Detail

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General Information

Database ID: exR0385731 RNA Name: RPL37 RNA Type: mRNA Chromosome: chr5 Starnd: - Coordinate: Start Site(bp): 40825262 End Site(bp): 40835222 External Links: ENSG00000145592

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AC005837.2 chr17 76732978 76738522 + AC138811.2 chr16 18788063 18801519 - AGAP4 chr10 45825594 45853875 - AHDC1 chr1 27534035 27604431 - AL360181.3 chr10 133380017 133420271 + ACTR2 chr2 65227753 65271253 + ALDOA chr16 30064164 30070457 + AKR1C1 chr10 4963253 4983283 + AC073896.1 chr12 56285916 56316059 - AC009690.1 chr15 72284727 72375981 - AC010422.5 chr19 12664828 12669397 - ACTG1 chr17 81509971 81523847 - AICDA chr12 8602170 8612867 - ABCC5 chr3 183919934 184017939 - AC005258.1 chr19 2269525 2341172 + AC018523.2 chr11 14493783 14520344 - A1BG chr19 58345178 58353492 - AFTPH chr2 64524305 64593005 + AL590132.1 chr1 210858125 211134146 - ACTB chr7 5527148 5563784 - ACKR3 chr2 236567787 236582354 + AGO4 chr1 35808016 35857890 + AC135050.2 chr16 31083439 31094956 - AHCYL1 chr1 109984765 110023742 + AKT3 chr1 243488233 243851079 - AGAP1 chr2 235494043 236131800 + ABHD14B chr3 51968510 51983409 - AKIRIN1 chr1 38991276 39006059 + AC008750.8 chr19 51350373 51368099 - ADIPOR2 chr12 1688574 1788674 + miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-302c-3p chr4 112648366 112648388 - circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC002470.2 chr22 20979462 20998121 + AC012313.3 chr19 58346854 58362751 - AC113414.1 chr5 162424042 163437326 - AC245014.3 chr1 145281116 145281462 + AC245033.4 chr15 82533175 82540008 - AL022311.1 chr22 37876148 37895563 + AL132780.1 chr14 22929607 22956374 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA