exRNAdisease

Entry Detail

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General Information

Database ID: exR0385732 RNA Name: RPL37A RNA Type: mRNA Chromosome: chr2 Starnd: + Coordinate: Start Site(bp): 216498825 End Site(bp): 216579180 External Links: ENSG00000197756

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AC015813.2 chr17 57989038 58007246 - AK2 chr1 33007940 33080996 - AL136295.5 chr14 24147548 24166452 + AC068547.1 chr2 151802651 151973949 - ACTN4 chr19 38647649 38731589 + AC007192.1 chr19 18153158 18178117 + ADGRL2 chr1 81306160 81992436 + AC124312.1 chr15 24955034 25000276 + ACTB chr7 5527148 5563784 - AL136295.1 chr14 24189157 24213473 - AATF chr17 36948954 37056871 + AC068580.4 chr11 1734821 1763954 - AKIRIN1 chr1 38991276 39006059 + ADPRH chr3 119579268 119589945 + AL139011.2 chr1 160216800 160285130 - AC093827.5 chr4 86886472 86936178 - ABRACL chr6 139028745 139043302 + ABT1 chr6 26596953 26600739 + ACTR3 chr2 113890063 113962596 + AC092718.8 chr16 81022316 81096284 - AKIRIN2 chr6 87674860 87702233 - AC073508.2 chr17 40627356 40665141 - ALDH7A1 chr5 126531200 126595362 - AL133352.1 chr10 100505628 100529881 - AL049844.3 chr6 143857318 143938471 + ADD1 chr4 2843857 2930076 + ADAMTS3 chr4 72280969 72569221 - AC092718.3 chr16 81053587 81096296 - ADAL chr15 43330657 43354555 + ABCE1 chr4 145098288 145129524 + miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-155-5p chr21 25573983 25574006 + hsa-miR-155-3p chr21 25574022 25574043 + circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC010729.1 chr2 5726253 5730355 + AC016747.4 chr2 61115787 61164825 + AC016876.2 chr17 7581964 7584086 - AC020978.7 chr16 68224713 68227734 + AC023509.1 chr12 53441741 53467528 + AC040934.1 chr17 47409322 47423526 - AC073321.1 chr2 216594359 216611206 + AC093827.4 chr4 86924630 86936202 - AC105105.1 chr18 58535415 58538552 + AC106739.1 chr16 27313387 27314101 - AL096870.2 chr14 24209646 24215987 - Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA