exRNAdisease

Entry Detail

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General Information

Database ID: exR0385733 RNA Name: RPL38 RNA Type: mRNA Chromosome: chr17 Starnd: + Coordinate: Start Site(bp): 74203582 End Site(bp): 74210655 External Links: ENSG00000172809

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AC005258.1 chr19 2269525 2341172 + AC011462.1 chr19 41350853 41425001 + AC023055.1 chr12 55757275 55827546 - AC048338.1 chr12 122207779 122266423 - AC098484.3 chr1 42767292 42794493 + AC104109.3 chr5 134167170 134226071 - AC120057.2 chr17 7240427 7244635 - ACADVL chr17 7217125 7225266 + ACTB chr7 5527148 5563784 - ACTG1 chr17 81509971 81523847 - ACTL6A chr3 179562886 179588407 + ACTN4 chr19 38647649 38731589 + ACTR2 chr2 65227753 65271253 + ADCY1 chr7 45574140 45723116 + ADGRA3 chr4 22345071 22516066 - AEN chr15 88621337 88632281 + AHCY chr20 34280268 34311802 - AKAP7 chr6 131135467 131283535 + AKNA chr9 114334156 114394405 - ALAS1 chr3 52198086 52214327 + ALDH5A1 chr6 24494867 24537207 + miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC005618.1 chr5 141326210 141329357 + AC144548.1 chr12 110387463 110445548 - AD000090.1 chr19 35557956 35581954 + AL022311.1 chr22 37876148 37895563 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA