exRNAdisease

Entry Detail

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General Information

Database ID: exR0385737 RNA Name: RPL4 RNA Type: mRNA Chromosome: chr15 Starnd: - Coordinate: Start Site(bp): 66498015 End Site(bp): 66524532 External Links: ENSG00000174444

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AIF1L chr9 131096476 131123152 + ADD1 chr4 2843857 2930076 + AL049629.2 chr11 33698261 33722467 - AL133352.1 chr10 100505628 100529881 - AASDHPPT chr11 106075501 106098699 + AC004223.3 chr17 35011349 35121493 - ABT1 chr6 26596953 26600739 + ADSL chr22 40346500 40390463 + AC245033.1 chr15 82536788 82573194 - AC013394.1 chr15 92883413 92949230 + AC008982.1 chr19 38817471 38840178 - AC003002.3 chr19 57389884 57419994 + ACTN4 chr19 38647649 38731589 + ADD2 chr2 70607618 70768225 - ADGRL2 chr1 81306160 81992436 + AC004922.1 chr7 99325879 99394653 + AC120057.2 chr17 7240427 7244635 - ALAD chr9 113386312 113401290 - ACTC1 chr15 34790230 34795549 - ADAR chr1 154582057 154628013 - AIMP1 chr4 106315544 106349456 + ADCY3 chr2 24819169 24919839 - AC015813.2 chr17 57989038 58007246 - ABRACL chr6 139028745 139043302 + AD000671.2 chr19 35739252 35745432 - ACP5 chr19 11574660 11579008 - AGBL5 chr2 27042364 27070622 + ABCC4 chr13 95019835 95301475 - AC007192.1 chr19 18153158 18178117 + AGAP2 chr12 57723761 57742157 - miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-3654 chr7 133034860 133034878 - hsa-miR-4745-5p chr19 804941 804963 + hsa-miR-6889-5p chr22 41253023 41253045 - circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC005899.4 chr17 32328441 32329395 + AC007952.4 chr17 19112000 19112636 - AC016026.1 chr22 17787652 17811497 - AC016876.2 chr17 7581964 7584086 - AC026362.1 chr12 122975320 122982907 + AC051619.7 chr15 45200325 45200632 - AC126365.1 chr17 20788071 20789584 + AC245033.4 chr15 82533175 82540008 - AD000090.1 chr19 35557956 35581954 + AL022311.1 chr22 37876148 37895563 + AL117378.1 chr6 131901963 131920565 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA