exRNAdisease

Entry Detail

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General Information

Database ID: exR0385748 RNA Name: RPLP2 RNA Type: mRNA Chromosome: chr11 Starnd: + Coordinate: Start Site(bp): 809965 End Site(bp): 812880 External Links: ENSG00000177600

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AC010646.1 chr19 17235940 17255448 - ALDOA chr16 30064164 30070457 + AL139300.1 chr14 103562962 103685924 + AC011455.2 chr19 38915404 38949855 - AGO4 chr1 35808016 35857890 + AKAP1 chr17 57085092 57121346 + AC007192.1 chr19 18153158 18178117 + AC135050.2 chr16 31083439 31094956 - ADGRL2 chr1 81306160 81992436 + AC010422.3 chr19 12643831 12648397 - AC020915.5 chr19 58228914 58315183 + AKT2 chr19 40230317 40285536 - AFTPH chr2 64524305 64593005 + ACIN1 chr14 23058564 23095614 - AIFM1 chrX 130129362 130165887 - AC004922.1 chr7 99325879 99394653 + AL049629.2 chr11 33698261 33722467 - ADCY1 chr7 45574140 45723116 + ACTG1 chr17 81509971 81523847 - AFDN chr6 167826922 167972023 + AC005258.1 chr19 2269525 2341172 + ADRM1 chr20 62302093 62308862 + AL121594.1 chr14 35122549 35317474 + ALDH18A1 chr10 95605941 95656711 - AGRN chr1 1020120 1056118 + ADH5 chr4 99070978 99088801 - AACS chr12 125065434 125143333 + AGBL5 chr2 27042364 27070622 + ABCF1 chr6 30571393 30597179 + AC008878.3 chr19 7382834 7470241 + miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-7705 chr8 100703002 100703024 - circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC007780.1 chr17 68413623 68524949 + AC017104.1 chr2 231388976 231394991 + AC018521.1 chr17 47945424 47981736 + AC026362.1 chr12 122975320 122982907 + AD000090.1 chr19 35557956 35581954 + AL137782.1 chr13 75549773 75807120 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA