exRNAdisease

Entry Detail

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General Information

Database ID: exR0385773 RNA Name: RPS18 RNA Type: mRNA Chromosome: chr6 Starnd: + Coordinate: Start Site(bp): 33272075 End Site(bp): 33276511 External Links: ENSG00000231500

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AHCY chr20 34280268 34311802 - AKIRIN1 chr1 38991276 39006059 + AC015802.6 chr17 76563710 76570544 - AC024592.3 chr19 5866171 5903787 - ABRACL chr6 139028745 139043302 + ABTB2 chr11 34150987 34358010 - ADGRL2 chr1 81306160 81992436 + AIFM1 chrX 130129362 130165887 - ALDOA chr16 30064164 30070457 + AKR1A1 chr1 45550543 45570049 + AC005258.1 chr19 2269525 2341172 + AFG3L2 chr18 12328944 12377227 - ABCB7 chrX 75051048 75156732 - AGO2 chr8 140520156 140635633 - AASDH chr4 56338287 56387508 - AKT1S1 chr19 49869033 49878459 - AC011462.1 chr19 41350853 41425001 + ACTB chr7 5527148 5563784 - AEBP2 chr12 19404045 19720801 + ACTR3 chr2 113890063 113962596 + AAR2 chr20 36236459 36270918 + AC008982.1 chr19 38817471 38840178 - ACAA2 chr18 49782164 49813953 - AC007040.2 chr2 70939318 70995336 - ADRA2A chr10 111077029 111080907 + AC011005.1 chr7 129126518 129130793 + AC023055.1 chr12 55757275 55827546 - ACTR2 chr2 65227753 65271253 + AC010422.3 chr19 12643831 12648397 - AC073508.2 chr17 40627356 40665141 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC004080.6 chr7 27128969 27152561 - AC004687.1 chr17 58330884 58332508 - AC021078.1 chr5 149494314 149504670 - AC040162.3 chr16 67882461 67886367 + AC091564.7 chr11 6610883 6616594 - AC105339.2 chr15 82752884 82757208 + AC138089.1 chr1 248484245 248485484 - Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA