exRNAdisease

Entry Detail

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General Information

Database ID: exR0386754 RNA Name: SLC4A2 RNA Type: mRNA Chromosome: chr7 Starnd: + Coordinate: Start Site(bp): 151057210 End Site(bp): 151076526 External Links: ENSG00000164889

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ABCC10 chr6 43427366 43450427 + ABHD12 chr20 25294742 25390835 - AC010422.3 chr19 12643831 12648397 - AC011448.1 chr19 19516227 19536076 + ADIPOR2 chr12 1688574 1788674 + AEN chr15 88621337 88632281 + AGRN chr1 1020120 1056118 + AJUBA chr14 22971177 22982551 - ALCAM chr3 105366909 105576900 + miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC006504.5 chr19 27793431 27984984 + AC007383.2 chr2 206084605 206086564 + AC020663.1 chr16 4730115 4752565 - AC026362.1 chr12 122975320 122982907 + AC125611.4 chr12 49292631 49324576 - AD000090.1 chr19 35557956 35581954 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA