exRNAdisease

Entry Detail

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General Information

Database ID: exR0389522 RNA Name: WDR74 RNA Type: mRNA Chromosome: chr11 Starnd: - Coordinate: Start Site(bp): 62832342 End Site(bp): 62841809 External Links: ENSG00000133316

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AARS2 chr6 44298731 44313347 - ABCA13 chr7 48171458 48647497 + ABL2 chr1 179099330 179229684 - AC005943.1 chr19 1578339 1605445 - AC006064.6 chr12 6556886 6607367 - AC011005.1 chr7 129126518 129130793 + AC011448.1 chr19 19516227 19536076 + AC126283.2 chr4 109713916 109801999 - AC245033.1 chr15 82536788 82573194 - ACO2 chr22 41469117 41528989 + ACTG1 chr17 81509971 81523847 - ADARB1 chr21 45073853 45226560 + AHSA1 chr14 77457870 77469472 + AKAP12 chr6 151239967 151358559 + AKR1A1 chr1 45550543 45570049 + AL136295.4 chr14 24180395 24190416 - ALDOA chr16 30064164 30070457 + miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-155-5p chr21 25573983 25574006 + hsa-miR-1246 chr2 176601024 176601042 - hsa-miR-3609 chr7 98881700 98881723 + hsa-miR-664b-5p chrX 154768596 154768619 + circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC006064.5 chr12 6510275 6510522 + AC007952.4 chr17 19112000 19112636 - AC010442.1 chr5 466124 473098 - AC114781.2 chr4 83233512 83247213 - AC245014.3 chr1 145281116 145281462 + AC245033.4 chr15 82533175 82540008 - AD000090.1 chr19 35557956 35581954 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA