Entry Detail


General Information

Database ID:exR0390455
RNA Name:AAMDC
RNA Type:mRNA
Chromosome:chr11
Starnd:+
Coordinate:
Start Site(bp):77821109End Site(bp):77918432
External Links:ENSG00000087884



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE64951
Description:Discovered salivary transcriptomic biomarkers for the detection of gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Normal
Number of Case:63
Number of Control:31
Number of Samples:94





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ATF6B
chr6
32115264
32128253
-
BAZ2A
chr12
56595596
56636816
-
CALM3
chr19
46601074
46610782
+
EIF3L
chr22
37848868
37889407
+
HAPLN3
chr15
88877288
88895626
-
ILKAP
chr2
238170402
238203708
-
IMP4
chr2
130342877
130347967
+
LHPP
chr10
124461823
124617888
+
MTFR1L
chr1
25818640
25832942
+
RPL18
chr19
48615328
48619184
-
SH3GL1
chr19
4360370
4400547
-
TPM4
chr19
16067021
16103002
+
TTC17
chr11
43358920
43494933
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE64951
Sample Source:Saliva
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:Saliva was spun down to collect cell-free saliva supernatant.
RNA Extract protocol:Total RNA was extracted by using Qiagen Rneasy kit.
RNA library preparation protocol:Standard Affymetrix protocol.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA