Entry Detail


General Information

Database ID:exR0390512
RNA Name:ABHD10
RNA Type:mRNA
Chromosome:chr3
Starnd:+
Coordinate:
Start Site(bp):111979010End Site(bp):111993368
External Links:ENSG00000144827



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE64951
Description:Discovered salivary transcriptomic biomarkers for the detection of gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Normal
Number of Case:63
Number of Control:31
Number of Samples:94





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
RPN2
chr20
37178410
37241619
+
STAC2
chr17
39210541
39225945
-
GLUL
chr1
182381704
182392206
-
COL4A2
chr13
110305812
110513209
+
YBX3
chr12
10699089
10723323
-
CXCR4
chr2
136114349
136118149
-
LBHD1
chr11
62662817
62672255
-
PPIA
chr7
44796680
44824564
+
C11orf98
chr11
62662816
62665217
-
RPL13
chr16
89560657
89566828
+
MBD4
chr3
129430944
129440179
-
MTRNR2L8
chr11
10507894
10509186
-
DIDO1
chr20
62877738
62937952
-
MYO1G
chr7
44962662
44979088
-
CTSZ
chr20
58995185
59007254
-
EEF1D
chr8
143579697
143599541
-
AP001458.2
chr11
62649694
62665178
-
TBP
chr6
170554302
170572870
+
RPL3
chr22
39312882
39320389
-
INTS12
chr4
105682627
105895986
-
RPS23
chr5
82273320
82278396
-
ATXN7
chr3
63864557
64003462
+
MPP6
chr7
24573268
24694193
+
RPS5
chr19
58386400
58394806
+
RPL27A
chr11
8682788
8714759
+
TBC1D10B
chr16
30357102
30370494
-
TALDO1
chr11
747415
765012
+
CLCN3
chr4
169612633
169723673
+
ZNF277
chr7
112206695
112343934
+
UBXN7
chr3
196347662
196432430
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE64951
Sample Source:Saliva
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:Saliva was spun down to collect cell-free saliva supernatant.
RNA Extract protocol:Total RNA was extracted by using Qiagen Rneasy kit.
RNA library preparation protocol:Standard Affymetrix protocol.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA