Entry Detail


General Information

Database ID:exR0390516
RNA Name:ABHD13
RNA Type:mRNA
Chromosome:chr13
Starnd:+
Coordinate:
Start Site(bp):108218392End Site(bp):108234243
External Links:ENSG00000139826



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE64951
Description:Discovered salivary transcriptomic biomarkers for the detection of gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Normal
Number of Case:63
Number of Control:31
Number of Samples:94





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ANKRD46
chr8
100509752
100559784
-
ARMT1
chr6
151452258
151470101
+
CCR7
chr17
40553769
40565472
-
CHIC1
chrX
73563200
73687102
+
CUL4A
chr13
113208193
113267108
+
HDAC2
chr6
113933028
114011308
-
HSPA4
chr5
133052013
133106449
+
IDH1
chr2
208236227
208266074
-
LIN28A
chr1
26410817
26429728
+
MRI1
chr19
13764522
13774282
+
MT-ND4
chrMT
10760
12137
+
PPM1G
chr2
27381195
27409591
-
RAB18
chr10
27504174
27542237
+
RAB7A
chr3
128726183
128814798
+
RCN2
chr15
76931738
76954393
+
RHEB
chr7
151466012
151520120
-
RHOT1
chr17
32142454
32253374
+
RNF138
chr18
32091874
32131561
+
SCAMP3
chr1
155255979
155262430
-
SSRP1
chr11
57325986
57335892
-
STIM2
chr4
26857601
27025381
+
SV2A
chr1
149903318
149917844
-
TRIP6
chr7
100867387
100873454
+
U2AF1
chr21
43092956
43107587
-
U2AF1L5
chr21
6484623
6499261
-
UBR4
chr1
19074510
19210266
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE64951
Sample Source:Saliva
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:Saliva was spun down to collect cell-free saliva supernatant.
RNA Extract protocol:Total RNA was extracted by using Qiagen Rneasy kit.
RNA library preparation protocol:Standard Affymetrix protocol.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA