Entry Detail


General Information

Database ID:exR0390518
RNA Name:ABHD14A-ACY1
RNA Type:mRNA
Chromosome:chr3
Starnd:+
Coordinate:
Start Site(bp):51974706End Site(bp):51989183
External Links:ENSG00000114786



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE64951
Description:Discovered salivary transcriptomic biomarkers for the detection of gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Normal
Number of Case:63
Number of Control:31
Number of Samples:94





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
TUBA1B
chr12
49127782
49131397
-
PPP2R5E
chr14
63371364
63543377
-
KDELR2
chr7
6445953
6484190
-
GNL3
chr3
52681156
52694497
+
PLAT
chr8
42174718
42207676
-
ABCG2
chr4
88090150
88231628
-
PPTC7
chr12
110533245
110583318
-
HERC1
chr15
63608618
63833948
-
LSM10
chr1
36391238
36397908
-
ANP32A
chr15
68778535
68820897
-
NEDD8
chr14
24216857
24232367
-
UCKL1
chr20
63939829
63956416
-
POU5F1
chr6
31164337
31180731
-
SRSF1
chr17
58000919
58007346
-
PRPF38B
chr1
108692310
108702928
+
ABHD14A
chr3
51971426
51981199
+
RPS3
chr11
75399515
75422280
+
HSP90AB1
chr6
44246166
44253888
+
MDK
chr11
46380756
46383837
+
ZNF623
chr8
143636013
143656418
+
ENDOG
chr9
128818500
128822676
+
RPLP0
chr12
120196699
120201235
-
PPP6R2
chr22
50343304
50445090
+
TMEM184B
chr22
38219291
38273010
-
OAS2
chr12
112978395
113011723
+
TRIM28
chr19
58544064
58550722
+
INVS
chr9
100099243
100302175
+
MSN
chrX
65588377
65741931
+
ILF3
chr19
10654261
10692417
+
LASP1
chr17
38869859
38921770
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-625-5p
chr14
65471116
65471136
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AD000090.1
chr19
35557956
35581954
+
DANCR
chr4
52712404
52720351
+
Display:



Experiment Detail

GEO ID:GSE64951
Sample Source:Saliva
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:Saliva was spun down to collect cell-free saliva supernatant.
RNA Extract protocol:Total RNA was extracted by using Qiagen Rneasy kit.
RNA library preparation protocol:Standard Affymetrix protocol.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA