Entry Detail


General Information

Database ID:exR0390523
RNA Name:ABHD17A
RNA Type:mRNA
Chromosome:chr19
Starnd:-
Coordinate:
Start Site(bp):1876810End Site(bp):1885547
External Links:ENSG00000129968



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE64951
Description:Discovered salivary transcriptomic biomarkers for the detection of gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Normal
Number of Case:63
Number of Control:31
Number of Samples:94





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
SLC20A2
chr8
42416475
42541926
-
PPP4R3A
chr14
91457611
91510554
-
AP001931.1
chr11
57741779
57804771
+
EFNB2
chr13
106489745
106535662
-
DNAJB1
chr19
14514769
14529770
-
RPS15
chr19
1438358
1440494
+
MSH5-SAPCD1
chr6
31740020
31764851
+
TUBB2A
chr6
3153666
3157544
-
NBEAL2
chr3
46979666
47009704
+
PRPF6
chr20
63981132
64033100
+
PIP5K1C
chr19
3630183
3700479
-
CEBPG
chr19
33373685
33382686
+
NAA16
chr13
41311267
41377030
+
SUPT5H
chr19
39436156
39476670
+
MT-CO2
chrMT
7586
8269
+
LUC7L2
chr7
139340359
139423457
+
AC091167.2
chr15
90249556
90272208
+
ELMO2
chr20
46366050
46432985
-
HNRNPH1
chr5
179614178
179634784
-
ACOT7
chr1
6264269
6394391
-
SETD5
chr3
9397615
9479240
+
ABHD17C
chr15
80679684
80755621
+
GPX4
chr19
1103926
1106791
+
EIF5
chr14
103333544
103345025
+
NUB1
chr7
151341699
151378449
+
FGFR1
chr8
38400215
38468834
-
NF2
chr22
29603556
29698598
+
RBCK1
chr20
407498
430966
+
UPF1
chr19
18831938
18868236
+
SLC25A3
chr12
98593591
98606379
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE64951
Sample Source:Saliva
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:Saliva was spun down to collect cell-free saliva supernatant.
RNA Extract protocol:Total RNA was extracted by using Qiagen Rneasy kit.
RNA library preparation protocol:Standard Affymetrix protocol.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA