Entry Detail


General Information

Database ID:exR0390524
RNA Name:ABHD17B
RNA Type:mRNA
Chromosome:chr9
Starnd:-
Coordinate:
Start Site(bp):71862452End Site(bp):71910931
External Links:ENSG00000107362



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE64951
Description:Discovered salivary transcriptomic biomarkers for the detection of gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Normal
Number of Case:63
Number of Control:31
Number of Samples:94





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
FBN2
chr5
128257909
128659185
-
EIF4G2
chr11
10797050
10808940
-
TXNDC12
chr1
52020131
52055191
-
CSTF3
chr11
33077188
33162371
-
GDI2
chr10
5765223
5842132
-
VAT1
chr17
43014607
43025123
-
PNRC2
chr1
23956839
23963462
+
MDK
chr11
46380756
46383837
+
IBTK
chr6
82169986
82247754
-
TMPO
chr12
98515512
98550379
+
SRP9
chr1
225777813
225790468
+
FBXL20
chr17
39252663
39402523
-
TPX2
chr20
31739271
31801805
+
SLC2A3
chr12
7919230
7936187
-
DDX42
chr17
63773603
63819317
+
SKA3
chr13
21153595
21176552
-
PA2G4
chr12
56104537
56113910
+
GOT2
chr16
58707131
58734342
-
CENPV
chr17
16342534
16353656
-
TOMM7
chr7
22812628
22822852
-
WBP4
chr13
41061509
41084006
+
RPS9
chr19
54200809
54249003
+
RPL37A
chr2
216498825
216579180
+
MT-CO2
chrMT
7586
8269
+
MRPL43
chr10
100969458
100987515
-
LAMA5
chr20
62307955
62367312
-
VPS51
chr11
65089324
65111862
+
GNAL
chr18
11689264
11885685
+
EEF1G
chr11
62559596
62574086
-
KLHDC2
chr14
49768130
49786385
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE64951
Sample Source:Saliva
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:Saliva was spun down to collect cell-free saliva supernatant.
RNA Extract protocol:Total RNA was extracted by using Qiagen Rneasy kit.
RNA library preparation protocol:Standard Affymetrix protocol.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA