Entry Detail


General Information

Database ID:exR0390530
RNA Name:ABHD6
RNA Type:mRNA
Chromosome:chr3
Starnd:+
Coordinate:
Start Site(bp):58237532End Site(bp):58295693
External Links:ENSG00000163686



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE64951
Description:Discovered salivary transcriptomic biomarkers for the detection of gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Normal
Number of Case:63
Number of Control:31
Number of Samples:94





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC010422.3
chr19
12643831
12648397
-
AMY2B
chr1
103553815
103579534
+
FSTL1
chr3
120392293
120450993
-
GSKIP
chr14
96363452
96387288
+
HLA-B
chr6
31269491
31357188
-
NDUFA10
chr2
239892450
240025345
-
NME2
chr17
51165435
51171747
+
PSMD14
chr2
161308425
161411717
+
RPL27A
chr11
8682788
8714759
+
SLC12A8
chr3
125082636
125212864
-
SLC25A29
chr14
100291116
100306547
-
SMU1
chr9
33041765
33076674
-
SRSF5
chr14
69726900
69772005
+
SSBP4
chr19
18418864
18434562
+
TERF2IP
chr16
75647773
75761872
+
TICRR
chr15
89575469
89631056
+
TMED7
chr5
115613210
115632992
-
TPI1
chr12
6867119
6870948
+
UBR7
chr14
93207241
93229215
+
VIM
chr10
17228241
17237593
+
WIPF1
chr2
174559572
174682916
-
ZFAND2B
chr2
219195237
219209651
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC016598.1
chr5
143489855
143531350
-
Display:



Experiment Detail

GEO ID:GSE64951
Sample Source:Saliva
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:Saliva was spun down to collect cell-free saliva supernatant.
RNA Extract protocol:Total RNA was extracted by using Qiagen Rneasy kit.
RNA library preparation protocol:Standard Affymetrix protocol.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA