Entry Detail


General Information

Database ID:exR0390551
RNA Name:ACACB
RNA Type:mRNA
Chromosome:chr12
Starnd:+
Coordinate:
Start Site(bp):109116595End Site(bp):109268226
External Links:ENSG00000076555



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE64951
Description:Discovered salivary transcriptomic biomarkers for the detection of gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Normal
Number of Case:63
Number of Control:31
Number of Samples:94





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
CALM1
chr14
90396502
90408268
+
CARM1
chr19
10871513
10923070
+
EEA1
chr12
92770637
92929331
-
GATAD2B
chr1
153789030
153923360
-
HDLBP
chr2
241227264
241317061
-
IQGAP1
chr15
90388242
90502239
+
LGMN
chr14
92703807
92748679
-
MAEA
chr4
1289887
1340147
+
MAPK3
chr16
30114105
30123506
-
MMAB
chr12
109553715
109573580
-
MRPL22
chr5
154941073
154969411
+
NRIP1
chr21
14961235
15065936
-
NUFIP2
chr17
29255839
29294148
-
PKM
chr15
72199029
72231822
-
PVR
chr19
44643798
44666162
+
SLC16A1
chr1
112911847
112957013
-
TIMP3
chr22
32801701
32863043
+
TPX2
chr20
31739271
31801805
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC007637.1
chr12
109111218
109125594
+
Display:



Experiment Detail

GEO ID:GSE64951
Sample Source:Saliva
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:Saliva was spun down to collect cell-free saliva supernatant.
RNA Extract protocol:Total RNA was extracted by using Qiagen Rneasy kit.
RNA library preparation protocol:Standard Affymetrix protocol.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA