Entry Detail


General Information

Database ID:exR0390552
RNA Name:ACAD10
RNA Type:mRNA
Chromosome:chr12
Starnd:+
Coordinate:
Start Site(bp):111686056End Site(bp):111757107
External Links:ENSG00000111271



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE64951
Description:Discovered salivary transcriptomic biomarkers for the detection of gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Normal
Number of Case:63
Number of Control:31
Number of Samples:94





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
NDUFA10
chr2
239892450
240025345
-
GPCPD1
chr20
5544439
5611006
-
IPP
chr1
45694324
45750653
-
MRM2
chr7
2234195
2242205
-
SLAMF6
chr1
160485030
160523262
-
MYH9
chr22
36281277
36388067
-
SLC52A2
chr8
144354135
144361272
+
CPT1C
chr19
49690898
49713731
+
PSMD11
chr17
32444379
32483319
+
HMGB2
chr4
173331376
173334432
-
SP110
chr2
230167293
230225729
-
CBX3
chr7
26201162
26213607
+
DNAJC25
chr9
111631334
111654351
+
PTP4A3
chr8
141391995
141432454
+
CMTR1
chr6
37433219
37482827
+
PLXNA1
chr3
126988594
127037392
+
ZBED4
chr22
49853844
49890080
+
ST8SIA1
chr12
22063773
22437041
-
ACTN1
chr14
68874143
68979440
-
UBE2Z
chr17
48908407
48929056
+
GRK2
chr11
67266473
67286556
+
DCTN2
chr12
57530102
57547331
-
FOXM1
chr12
2857681
2877155
-
MT-ND1
chrMT
3307
4262
+
VIPAS39
chr14
77426675
77457952
-
EPM2AIP1
chr3
36985043
36993131
-
ST6GAL1
chr3
186930502
187078553
+
TPGS2
chr18
36777647
36829216
-
AL132780.3
chr14
22946270
22982258
-
FSCN3
chr7
127591409
127602144
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE64951
Sample Source:Saliva
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:Saliva was spun down to collect cell-free saliva supernatant.
RNA Extract protocol:Total RNA was extracted by using Qiagen Rneasy kit.
RNA library preparation protocol:Standard Affymetrix protocol.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA