Entry Detail


General Information

Database ID:exR0390553
RNA Name:ACAD11
RNA Type:mRNA
Chromosome:chr3
Starnd:-
Coordinate:
Start Site(bp):132558138End Site(bp):132660082
External Links:ENSG00000240303



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE64951
Description:Discovered salivary transcriptomic biomarkers for the detection of gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Normal
Number of Case:63
Number of Control:31
Number of Samples:94





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
NPHP3-ACAD11
chr3
132558142
132722459
-
BET1L
chr11
167784
207428
-
P4HB
chr17
81843161
81860624
-
STIM1
chr11
3854527
4093210
+
HLA-DQA1
chr6
32628179
32647062
+
FAR1
chr11
13668668
13732346
+
PUM2
chr2
20248691
20352234
-
TCIRG1
chr11
68039025
68050895
+
PIK3C2A
chr11
17077730
17207983
-
PRPF8
chr17
1650629
1684867
-
RPS8
chr1
44775251
44778779
+
HADH
chr4
107989714
108035175
+
ZNF311
chr6
28994785
29005316
-
MDN1
chr6
89642498
89819794
-
PPOX
chr1
161166056
161178013
+
CD52
chr1
26317958
26320523
+
RPL12
chr9
127447674
127451406
-
PMF1
chr1
156212993
156240042
+
HSPA9
chr5
138553756
138575416
-
SH3PXD2B
chr5
172325000
172454525
-
CACNA2D3
chr3
54122547
55074557
+
TK1
chr17
78174091
78187233
-
DNAJB1
chr19
14514769
14529770
-
ATP5IF1
chr1
28236109
28246906
+
NBDY
chrX
56729241
56819179
+
RABGAP1L
chr1
174159410
174995308
+
ZNF146
chr19
36214602
36238774
+
EHMT2
chr6
31879759
31897687
-
SGTB
chr5
65665928
65723035
-
MTHFD2
chr2
74198610
74217565
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AD000090.1
chr19
35557956
35581954
+
Display:



Experiment Detail

GEO ID:GSE64951
Sample Source:Saliva
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:Saliva was spun down to collect cell-free saliva supernatant.
RNA Extract protocol:Total RNA was extracted by using Qiagen Rneasy kit.
RNA library preparation protocol:Standard Affymetrix protocol.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA