Entry Detail


General Information

Database ID:exR0390558
RNA Name:ACADS
RNA Type:mRNA
Chromosome:chr12
Starnd:+
Coordinate:
Start Site(bp):120725774End Site(bp):120740008
External Links:ENSG00000122971



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE64951
Description:Discovered salivary transcriptomic biomarkers for the detection of gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Normal
Number of Case:63
Number of Control:31
Number of Samples:94





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC004832.3
chr22
30409255
30428990
+
AP002990.1
chr11
62559603
62591531
-
CD52
chr1
26317958
26320523
+
CHD4
chr12
6570082
6614524
-
CYSTM1
chr5
140175156
140282052
+
DNAJC5
chr20
63895126
63936031
+
EEF1G
chr11
62559596
62574086
-
EIF2B1
chr12
123620406
123633766
-
EIF3J
chr15
44537125
44563029
+
EIF5AL1
chr10
79512601
79516440
+
GPAT2
chr2
96021946
96039451
-
HNRNPA2B1
chr7
26173057
26201529
-
IMP3
chr15
75639085
75648706
-
LRRK1
chr15
100919327
101078257
+
MCM7
chr7
100092728
100101940
-
MLH1
chr3
36993350
37050846
+
MTFP1
chr22
30425623
30429054
+
PFKL
chr21
44300051
44327376
+
PIP4K2C
chr12
57591174
57603418
+
PPP2R1A
chr19
52190048
52229518
+
RPLP1
chr15
69452814
69456205
+
RPS3
chr11
75399515
75422280
+
SMAD7
chr18
48919853
48952052
-
STIM1
chr11
3854527
4093210
+
TBX3
chr12
114670255
114684175
-
TPI1
chr12
6867119
6870948
+
TUBB
chr6
30720352
30725426
+
UNC119B
chr12
120710458
120723640
+
VCP
chr9
35056064
35072627
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE64951
Sample Source:Saliva
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:Saliva was spun down to collect cell-free saliva supernatant.
RNA Extract protocol:Total RNA was extracted by using Qiagen Rneasy kit.
RNA library preparation protocol:Standard Affymetrix protocol.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA