Entry Detail


General Information

Database ID:exR0390572
RNA Name:ACD
RNA Type:mRNA
Chromosome:chr16
Starnd:-
Coordinate:
Start Site(bp):67657512End Site(bp):67660815
External Links:ENSG00000102977



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE64951
Description:Discovered salivary transcriptomic biomarkers for the detection of gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Normal
Number of Case:63
Number of Control:31
Number of Samples:94





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
DHX9
chr1
182839347
182887982
+
DGCR2
chr22
19036282
19122454
-
HSP90AB1
chr6
44246166
44253888
+
AP002990.1
chr11
62559603
62591531
-
ZNF23
chr16
71447597
71463095
-
DUSP3
chr17
43766125
43778977
-
EEF1G
chr11
62559596
62574086
-
SEC22C
chr3
42547969
42601080
-
SLC35B2
chr6
44254096
44257890
-
PPM1A
chr14
60245752
60299087
+
CDK16
chrX
47217860
47229997
+
MEPCE
chr7
100428790
100434118
+
FGFRL1
chr4
1009936
1026898
+
NAA10
chrX
153929225
153935080
-
MT-CO1
chrMT
5904
7445
+
ATP6V1D
chr14
67294371
67360265
-
EFTUD2
chr17
44849948
44899445
-
TFAM
chr10
58385345
58399220
+
RAF1
chr3
12583601
12664226
-
MARCKSL1
chr1
32333839
32336233
-
CNOT1
chr16
58519951
58629885
-
FSTL3
chr19
676392
683392
+
HNRNPD
chr4
82352498
82374503
-
PCBP2
chr12
53452102
53481162
+
TSPAN9
chr12
3077355
3286564
+
PSMA4
chr15
78540405
78552417
+
GCN1
chr12
120127202
120194715
-
COX14
chr12
50112082
50120457
+
GNAS
chr20
58839718
58911192
+
RPS6KA1
chr1
26529761
26575030
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE64951
Sample Source:Saliva
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:Saliva was spun down to collect cell-free saliva supernatant.
RNA Extract protocol:Total RNA was extracted by using Qiagen Rneasy kit.
RNA library preparation protocol:Standard Affymetrix protocol.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA