Entry Detail


General Information

Database ID:exR0390585
RNA Name:ACO1
RNA Type:mRNA
Chromosome:chr9
Starnd:+
Coordinate:
Start Site(bp):32384603End Site(bp):32454769
External Links:ENSG00000122729



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE64951
Description:Discovered salivary transcriptomic biomarkers for the detection of gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Normal
Number of Case:63
Number of Control:31
Number of Samples:94





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
UBA52
chr19
18571730
18577550
+
SLC25A6
chrX
1386152
1392113
-
PCGF3
chr4
705748
770640
+
INSR
chr19
7112255
7294414
-
EEF2
chr19
3976056
3985463
-
UNG
chr12
109097574
109110992
+
STRN4
chr19
46719511
46746994
-
MIF
chr22
23894383
23895227
+
CRMP1
chr4
5748084
5893086
-
TOP2A
chr17
40388525
40417896
-
RAB3D
chr19
11322068
11346270
-
RPL17
chr18
49488453
49492523
-
RPL23
chr17
38847860
38853764
-
TMEM250
chr9
136114581
136118875
-
IGFBP5
chr2
216672105
216695549
-
XRCC5
chr2
216107464
216206303
+
RPL27
chr17
42998273
43002959
+
ZNF681
chr19
23739195
23758891
-
RLF
chr1
40161387
40240921
+
IMMT
chr2
86143932
86195770
-
ECD
chr10
73130155
73169055
-
PTPN11
chr12
112418351
112509913
+
TPT1
chr13
45333471
45341370
-
DAD1
chr14
22564907
22589224
-
AKAP1
chr17
57085092
57121346
+
CDCA7L
chr7
21900899
21945903
-
BID
chr22
17734138
17774770
-
WDR27
chr6
169457212
169702067
-
CCT7
chr2
73233420
73253021
+
CD274
chr9
5450503
5470566
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
OIP5-AS1
chr15
41283990
41309737
+
Display:



Experiment Detail

GEO ID:GSE64951
Sample Source:Saliva
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:Saliva was spun down to collect cell-free saliva supernatant.
RNA Extract protocol:Total RNA was extracted by using Qiagen Rneasy kit.
RNA library preparation protocol:Standard Affymetrix protocol.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA