Entry Detail


General Information

Database ID:exR0390597
RNA Name:ACOX1
RNA Type:mRNA
Chromosome:chr17
Starnd:-
Coordinate:
Start Site(bp):75941507End Site(bp):75979177
External Links:ENSG00000161533



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE64951
Description:Discovered salivary transcriptomic biomarkers for the detection of gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Normal
Number of Case:63
Number of Control:31
Number of Samples:94





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
RPS19
chr19
41860255
41872925
+
SAP18
chr13
21140514
21149084
+
LAMA3
chr18
23689443
23956222
+
ZNF512
chr2
27582969
27623217
+
ELAC2
chr17
12991612
13018065
-
C3orf52
chr3
112086335
112131004
+
MAZ
chr16
29806106
29811164
+
POU5F1
chr6
31164337
31180731
-
ZNF544
chr19
58228594
58277495
+
NUP205
chr7
135557917
135648757
+
OPA1
chr3
193593144
193697811
+
KIF14
chr1
200551497
200620751
-
WDR26
chr1
224385143
224437033
-
ELF4
chrX
130064874
130110716
-
ASXL1
chr20
32358330
32439319
+
NRF1
chr7
129611720
129757082
+
SMC3
chr10
110567691
110604636
+
OSBPL10
chr3
31657890
32077580
-
PSAP
chr10
71816298
71851325
-
TOX4
chr14
21476597
21499175
+
PPP6R1
chr19
55229779
55259017
-
RPL13A
chr19
49487554
49492308
+
TNFRSF13B
chr17
16929816
16972118
-
MREG
chr2
215942584
216034096
-
NDUFV1
chr11
67605653
67612554
+
PPM1G
chr2
27381195
27409591
-
HLA-A
chr6
29941260
29945884
+
NOP14
chr4
2937933
2963406
-
DCTPP1
chr16
30423615
30430030
-
RPL10L
chr14
46651010
46651781
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC138761.1
chr17
22266395
22288301
+
Display:



Experiment Detail

GEO ID:GSE64951
Sample Source:Saliva
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:Saliva was spun down to collect cell-free saliva supernatant.
RNA Extract protocol:Total RNA was extracted by using Qiagen Rneasy kit.
RNA library preparation protocol:Standard Affymetrix protocol.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA