Entry Detail


General Information

Database ID:exR0390600
RNA Name:ACOXL
RNA Type:mRNA
Chromosome:chr2
Starnd:+
Coordinate:
Start Site(bp):110732573End Site(bp):111118222
External Links:ENSG00000153093



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE64951
Description:Discovered salivary transcriptomic biomarkers for the detection of gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Normal
Number of Case:63
Number of Control:31
Number of Samples:94





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
BASP1
chr5
17065598
17276843
+
CTSA
chr20
45890144
45898820
+
DAG1
chr3
49468703
49535618
+
FBXO22
chr15
75903876
75942511
+
LCK
chr1
32251239
32286165
+
NAV1
chr1
201622885
201826969
+
OXLD1
chr17
81665036
81666635
-
PFN1
chr17
4945652
4949061
-
RHBDD2
chr7
75842602
75888926
+
RNF213
chr17
80260866
80398786
+
SBF1
chr22
50445000
50475035
-
SSTR3
chr22
37204237
37212477
-
TM9SF4
chr20
32109714
32167258
+
ZNF106
chr15
42412823
42491141
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE64951
Sample Source:Saliva
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:Saliva was spun down to collect cell-free saliva supernatant.
RNA Extract protocol:Total RNA was extracted by using Qiagen Rneasy kit.
RNA library preparation protocol:Standard Affymetrix protocol.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA