Entry Detail


General Information

Database ID:exR0390603
RNA Name:ACP6
RNA Type:mRNA
Chromosome:chr1
Starnd:-
Coordinate:
Start Site(bp):147629652End Site(bp):147670524
External Links:ENSG00000162836



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE64951
Description:Discovered salivary transcriptomic biomarkers for the detection of gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Normal
Number of Case:63
Number of Control:31
Number of Samples:94





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABHD12
chr20
25294742
25390835
-
ACSL1
chr4
184755595
184826818
-
BICD2
chr9
92711363
92764833
-
CHERP
chr19
16517894
16542437
-
CHRNB1
chr17
7445061
7457710
+
COX4I1
chr16
85798633
85807068
+
CPSF1
chr8
144393229
144409335
-
DERL3
chr22
23834503
23839128
-
DST
chr6
56457987
56954649
-
FBXO4
chr5
41925254
41941743
+
GDE1
chr16
19501693
19522123
-
GLCE
chr15
69160584
69272217
+
GLIS3
chr9
3824127
4348392
-
IFITM1
chr11
313506
315272
+
IFITM2
chr11
307631
315272
+
NUP214
chr9
131125586
131234663
+
PARP14
chr3
122680839
122730840
+
PCNA
chr20
5114953
5126626
-
PHF21B
chr22
44881162
45010005
-
PKM
chr15
72199029
72231822
-
PPRC1
chr10
102132994
102150333
+
RPL11
chr1
23691742
23696835
+
RPL5
chr1
92832013
92841924
+
SCD
chr10
100347233
100364826
+
TGFBRAP1
chr2
105264391
105329735
-
TRAM2
chr6
52497408
52577060
-
TUBG2
chr17
42659284
42667006
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC113189.4
chr17
7439506
7445966
+
Display:



Experiment Detail

GEO ID:GSE64951
Sample Source:Saliva
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:Saliva was spun down to collect cell-free saliva supernatant.
RNA Extract protocol:Total RNA was extracted by using Qiagen Rneasy kit.
RNA library preparation protocol:Standard Affymetrix protocol.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA