Entry Detail


General Information

Database ID:exR0390604
RNA Name:ACPP
RNA Type:mRNA
Chromosome:chr3
Starnd:+
Coordinate:
Start Site(bp):132317369End Site(bp):132368298
External Links:ENSG00000014257



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE64951
Description:Discovered salivary transcriptomic biomarkers for the detection of gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Normal
Number of Case:63
Number of Control:31
Number of Samples:94





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC120057.2
chr17
7240427
7244635
-
ADGRA3
chr4
22345071
22516066
-
AGTRAP
chr1
11736084
11754802
+
CHTOP
chr1
153633982
153646306
+
CLCN3
chr4
169612633
169723673
+
G3BP1
chr5
151771045
151812785
+
GABARAP
chr17
7240008
7242449
-
LZIC
chr1
9922113
9943407
-
NUDT16L1
chr16
4693694
4695859
+
OTUD5
chrX
48922028
48958386
-
PPIA
chr7
44796680
44824564
+
RPL13
chr16
89560657
89566828
+
RPL14
chr3
40457292
40468587
+
SAFB
chr19
5623035
5668478
+
SRSF1
chr17
58000919
58007346
-
STC2
chr5
173314713
173329503
-
TFG
chr3
100709331
100748964
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE64951
Sample Source:Saliva
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:Saliva was spun down to collect cell-free saliva supernatant.
RNA Extract protocol:Total RNA was extracted by using Qiagen Rneasy kit.
RNA library preparation protocol:Standard Affymetrix protocol.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA